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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866573.1_cds_XP_016432791.1_28999
CDS Infomation

[gene=LOC107759374] [db_xref=GeneID:107759374] [protein=squalene synthase-like isoform X2] [protein_id=XP_016432791.1] [location=complement(join(98856..98918,99010..99055,99126..99217,99642..99730,99981..100056,100932..101036,101303..101446,102063..102132,102773..102848,103047..103136,103560..103602,104720..104914))] [gbkey=CDS]
Sequence

ATGGGGAGTTTAGGAGCAATGCTGAGGAATCCTGAGGATATTTATCCATTGATGAAACTG
AAGTTAGCGGCGCGATATGCAGAGAAACAGATCCCTCCTCAGCCACATTGGGCCTTCTGT
TACATAATGCTTCGCAAGGTCTCTCGTAGCTTTTCTCTCGTCATTCAACAGCTTCCCGTG
GAACTTCGCGATGCTGTATGCATTTTCTATTTGGTTCTTCGAGCTCTTGACACTGTCGAG
GACGATACGAGTGTAGCCACAGAGGTGAAAGCACCTATATTGATGTCATTCCATCGCCAT
GTTTATGATCGTGAATGGCATTTTTCATGTGGTACAAAGGACTACAAGGTTCTTATGGAT
CAGTTCCATCATGTTTCAACTGCTTTTCTGGAGCTAGGGAAACATTACAAGGAGGCAATT
GAGGACATTACCATGAGGATGGGTGCTGGAATGGCAAAGTTTATATGCAAGGAGGTGGAA
ACAATTGATGATTATGCTGAATATTGTCACTATGTAGCCGGGCTCGTTGGATTAGGCTTA
TCAAAACTTTTCCGCGCCTCTGGGAAAGAAGATTTGGTTTCAGATTCTCTCTCCAATTCC
ATGGGTTTATTTCTTCAGAAAACAAATATCATTAGAGATTATCTGGAGGACATAAATGAA
GTACCTAAGTGTCGCATGTTTTGGCCTCGTCAGATTTGGAGTAAATACGTTAACAAGCTC
GAGGTCATGGCAATTGGGACATTAGCAAAGTGCTACAACAACATAGAAGTTTTCAGAGGA
GTTGTAAAAATGAGACGCGGTCTCACTGCTAAGGTTATTGACCGGACCAGGAACATGGCA
GATGTATATGGTGCTTTCTACGACTTCTCTTGTATTCTCAAATCCAAGGTGGAGTATAAA
GATCCAAATGCAGCAAAAACTTTAAGAAGGCTTGAAACAATTTTGAGAACTTGCAAAGAC
TCTGGAACCTTGAACAAAAGGAAATCTTTCGTAATCCAGAGCAGACCTAATTACAATTCA
GCTTTGGTTGTTGTCCTTGTTGTCATAATAGCTATCCTTAGTGCATACCAATCTGGAAAC
CGGCCTTAG

Peptide Sequence

PEP ID

XP_016432791.1
PEP Infomation

PREDICTED: squalene synthase-like isoform X2 [Nicotiana tabacum]
Sequence

MGSLGAMLRNPEDIYPLMKLKLAARYAEKQIPPQPHWAFCYIMLRKVSRSFSLVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSVATEVKAPILMSFHRHVYDREWHFSCGTKDYKVLMD
QFHHVSTAFLELGKHYKEAIEDITMRMGAGMAKFICKEVETIDDYAEYCHYVAGLVGLGL
SKLFRASGKEDLVSDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPRQIWSKYVNKL
EVMAIGTLAKCYNNIEVFRGVVKMRRGLTAKVIDRTRNMADVYGAFYDFSCILKSKVEYK
DPNAAKTLRRLETILRTCKDSGTLNKRKSFVIQSRPNYNSALVVVLVVIIAILSAYQSGN
RP

Transcript Sequence

Gene sequence data has not been registered.